The International Conference for High Performance Computing, Networking, Storage and Analysis

SC17

The International Conference for High Performance Computing, Networking, Storage and Analysis

Conference Dates: November 12-17, 2017 • Exhibition Dates: November 13-16, 2017
Colorado Convention Center

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Session

ACM Student Research Competition, Poster, Reception: Poster Reception
Session Chair
Kengo Nakajima
University of Tokyo
RIKEN
Event TypeACM Student Research Competition, Poster, Reception
Tags
TimeTuesday, November 14th5:15pm - 7pm
LocationFour Seasons Ballroom
Presentations
A01: GEMM-Like Tensor-Tensor Contraction (GETT)
Authors
Paul Springer
Paolo Bientinesi
A02: Accelerating the Higher Order Singular Value Decomposition Algorithm for Big Data with GPUs
Author
Yuhsiang M. Tsai
A03: A High-Speed Algorithm for Genome-Wide Association Studies on Multi-GPU Systems
Author
Yen Chen Chen
A04: Optimization of the AIREBO Many-Body Potential for KNL
Author
Markus Höhnerbach
A05: Parallel Prefix Algorithms for the Registration of Arbitrarily Long Electron Micrograph Series
Author
Marcin Copik
A06: Accelerating Big Data Processing in the Cloud with Scalable Communication and I/O Schemes
Author
Shashank Gugnani
A07: Scalable Parallel Scripting in the Cloud
Author
Benjamin H. Glick
A08: Virtualized Big Data: Reproducing Simulation Output on Demand
Author
Salvatore Di Girolamo
A09: Ring: Unifying Replication and Erasure Coding to Rule Resilience in KV-Stores
Author
Konstantin Taranov
A10: Revealing the Power of Neural Networks to Capture Accurate Job Resource Usage from Unparsed Job Scripts and Application Inputs
Author
Michael R. Wyatt
A11: Finding a Needle in a Field of Haystacks: Lightweight Metadata Search for Large-Scale Distributed Research Repositories
Author
Anna Blue Keleher
A12: Applying Image Feature Extraction to Cluttered Scientific Repositories
Author
Emily Herron
A13: Deep Learning with HPC Simulations for Extracting Hidden Signals: Detecting Gravitational Waves
Author
Daniel George
A14: Analysis of Synthetic Graph Generation Methods for Directed Network Graphs
Author
Spencer Callicott
A15: Quantifying Compiler Effects on Code Performance and Reproducibility Using FLiT
Author
Michael Bentley
A16: Diagnosing Parallel I/O Bottlenecks in HPC Applications
Author
Peter Z. Harrington
A17: Toward Capturing Nondeterminism Motifs in HPC Applications
Author
Dylan Chapp
A18: Understanding the Impact of Fat-Tree Network Locality on Application Performance
Author
Philip Taffet
A19: Performance Analysis of a Parallelized Restricted Boltzmann Machine Artificial Neural Network Using OpenACC Framework and TAU Profiling System
Author
Abhishek Kumar
A20: Correctness Verification and Boundary Conditions for Chapel Iterator-Based Loop Optimization
Author
Daniel A. Feshbach
A21: Runtime Support for Concurrent Execution of Overdecomposed Heterogeneous Tasks
Author
Jaemin Choi
A22: Verifying Functional Equivalence Between C and Fortran Programs
Author
Wenhao Wu
A23: Evaluation of Data-Intensive Applications on Intel Knights Landing Cluster
Author
Tao Gao
A24: Comparison of Machine Learning Algorithms and Their Ensembles for Botnet Detection
Author
Songhui Ryu
A25: Investigating Performance of Serialization Methods for Networked Data Transfer in HPC Applications
Author
Max Yang
A26: Co-Designing MPI Runtimes and Deep Learning Frameworks for Scalable Distributed Training on GPU Clusters
Author
Ammar Ahmad Awan
A27: High-Performance and Scalable Broadcast Schemes for Deep Learning on GPU Clusters
Author
Ching-Hsiang Chu
A28: Exploring Use Cases for Non-Volatile Memories in Support of HPC Resilience
Author
Onkar Patil
P01: Cache-Blocking Tiling of Large Stencil Codes at Runtime
Authors
Istvan Z. Reguly
Gihan R. Mudalige
Mike B. Giles
P02: Strassen's Algorithm for Tensor Contraction
Authors
Jianyu Huang
Devin A. Matthews
Robert A. van de Geijn
P03: BEM4I: A Massively Parallel Boundary Element Solver
Authors
Michal Merta
Jan Zapletal
Michal Kravcenko
Lukas Maly
P04: Unstructured-Grid CFD Algorithms on Many-Core Architectures
Authors
Aaron Walden
Eric J. Nielsen
Mohammad Zubair
John C. Linford
John G. Wohlbier
Justin P. Luitjens
Jason Orender
Izaak Beekman
Samuel Khuvis
Sameer S. Shende
P05: ooc_cuDNN : A Deep Learning Library Supporting CNNs over GPU Memory Capacity
Authors
Yuki Ito
Ryo Matsumiya
Toshio Endo
P06: Large Scale FFT-Based Stress-Strain Simulations with Irregular Domain Decomposition
Authors
Anuva Kulkarni
Franz Franchetti
Jelena Kovacevic
P07: PORTAGE - A Flexible Conservative Remapping Framework for Modern HPC Architectures
Authors
Rao V. Garimella
Peter D. Crossman
Gary A. Dilts
Rajeev S. Erramilli
Charles R. Ferenbaugh
Angela M. Herring
Eugene Kikinzon
Chris M. Malone
Navamita Ray
Mike L. Rogers
P08: Performance Optimization of Matrix-free Finite-Element Algorithms within deal.II
Authors
Martin Kronbichler
Karl Ljungkvist
Momme Allalen
Martin Ohlerich
Igor Pasichnyk
Wolfgang A. Wall
P09: Adaptive Multistep Predictor for Accelerating Dynamic Implicit Finite-Element Simulations
Authors
Kohei Fujita
Tsuyoshi Ichimura
Masashi Horikoshi
Muneo Hori
Lalith Maddegedara
P10: HiCOO: A Hierarchical Sparse Tensor Format for Tensor Decompositions
Authors
Jiajia Li
Jimeng Sun
Richard Vuduc
P11: Energy-Efficient Transprecision Techniques for Iterative Refinement
Authors
JunKyu Lee
Hans Vandierendonck
Dimitrios S. Nikolopoulos
P12: Multi-Size Optional Offline Caching Algorithms
Authors
Andrew Y. Choliy
Max D. Whitmore
Gruia Calinescu
P13: Large-Scale GW Calculations on Pre-Exascale HPC Systems
Authors
Mauro Del Ben
Felipe H. da Jornada
Andrew Canning
Nathan Wichmann
Karthik Raman
Ruchira Sasanka
Chao Yang
Steven G. Louie
P14: Robust SA-AMG Solver by Extraction of Near-Kernel Vectors
Authors
Naoya Nomura
Kengo Nakajima
Akihiro Fujii
P15: Toward Decoupling the Selection of Compression Algorithms from Quality Constraints
Authors
Julian Kunkel
Anastasiia Novikova
Eugen Betke
P16: Scaling Analysis of a Hierarchical Parallelization of Large Inverse Multiple-Scattering Solutions
Authors
Mert Hidayetoglu
Carl Pearson
Izzat El-Hajj
Weng Cho Chew
Levent Gurel
Wen-Mei Hwu
P17: Fully Non-Blocking Communication-Computation Overlap Using Assistant Cores toward Exascale Computing
Authors
Motoki Nakata
Masanori Nunami
Shinsuke Satake
Yoshihiro Kasai
Shinya Maeyama
Tomo-Hiko Watanabe
Yasuhiro Idomura
P18: A Parallel Python Implementation of BLAST+ (PPIB) for Characterization of Complex Microbial Consortia
Authors
Amina Jackson
William Connor Horne
Daniel Beall
Kenneth Jiang
William Judson Hervey
P19: MPI-GIS: An MPI System for Big Spatial Data
Author
Satish Puri
P20: Facilitating the Scalability of ParSplice for Exascale Testbeds
Authors
Vinay B. Ramakrishnaiah
Jonas L. Landsgesell
Ying Zhou
Iris Linck
Mouad Ramil
Joshua Bevan
Danny Perez
Louis J. Vernon
Thomas D. Swinburne
Robert S. Pavel
Christoph Junghans
P21: The First Real-Scale DEM Simulation of a Sandbox Experiment Using 2.4 Billion Particles
Authors
Mikito Furuichi
Daisuke Nishiura
Mitsuteru Asai
Takane Hori
P22: Numerical Simulation of Snow Accretion by Airflow Simulator and Particle Simulator
Authors
Kohei Murotani
Koji Nakade
Yasushi Kamata
P23: AI with Super-Computed Data for Monte Carlo Earthquake Hazard Classification
Authors
Tsuyoshi Ichimura
Kohei Fujita
Takuma Yamaguchi
Muneo Hori
Maddegedara Lalith
Naonori Ueda
P24: A Deployment of HPC Algorithm into Pre/Post-Processing for Industrial CFD on K-Computer
Authors
Keiji Onishi
Niclas Jansson
Rahul Bale
Wei-Hsiang Wang
Chung-Gang Li
Makoto Tsubokura
P25: Large-Scale Adaptive Mesh Simulations Through Non-Volatile Byte-Addressable Memory
Authors
Bao Nguyen
Hua Tan
Xuechen Zhang
P26: Optimizing Gravity and Nuclear Physics in FLASH for Exascale
Authors
Hannah Klion
Bronson Messer
J. Austin Harris
Thomas Papatheodore
P27: Parallelization of the Particle-In-Cell Monte Carlo Collision (PIC-MCC) Algorithm for Plasma Simulation on Intel MIC Xeon Phi Architecture
Authors
Keval Shah
Anusha Phadnis
Miral Shah
Bhaskar Chaudhury
P28: High-Fidelity Blade-Resolved Wind Plant Modeling
Authors
Andrew C. Kirby
Zhi Yang
Michael J. Brazell
Behzad R. Ahrabi
Jay Sitaraman
Dimitri J. Mavriplis
P29: A Deep Learning Tool for Fast Simulation
Authors
Sofia Vallecorsa
Gul rukh Khattak
Shruti Sharan
P30: MPI/OpenMP Parallelization of the Hartree-Fock Method for the Second Generation Intel Xeon Phi
Authors
Kristopher Keipert
Vladimir Mironov
Yuri Alexeev
Michael D'mello
Alexander Moskovsky
Mark S. Gordon
P31: Understanding the Performance of Small Convolution Operations for CNN on Intel Architecture
Authors
Alexander Heinecke
Evangelos Georganas
Kunal Banerjee
Dhiraj Kalmakar
Narayanan Sundaram
Anand Venkat
Greg Henry
Hans Pabst
P32: Exploring the Performance of Electron Correlation Method Implementations on Kove XPDs
Authors
Colleen Bertoni
Brian Toonen
William Allcock
Spencer R. Pruitt
Mark S. Gordon
P33: Massively Parallel Evolutionary Computation for Empowering Electoral Reform: Quantifying Gerrymandering via Multi-objective Optimization and Statistical Analysis
Authors
Wendy K. Cho
Yan Liu
P34: GPU Acceleration for the Impurity Solver in GW+DMFT Packages
Authors
Kwangmin Yu
Patrick Semon
Nicholas D'Imperio
P35: Using HPC to Model Quantum-Dot Cellular Automata
Author
Gabriel Hahn
P36: A Novel Feature-Preserving Spatial Mapping for Deep Learning Classification of Ras Structures
Authors
Thomas Corcoran
Rafael Zamora-Resendiz
Xinlian Liu
Silvia Crivelli
P37: PaSTRI: A Novel Data Compression Algorithm for Two-Electron Integrals in Quantum Chemistry
Authors
Ali Murat Gok
Dingwen Tao
Sheng Di
Vladimir Mironov
Yuri Alexeev
Franck Cappello
P38: Benchmarking Parallelized File Aggregation Tools for Large Scale Data Management
Authors
Tiffany Li
Craig Steffen
Ryan Chui
Roland Haas
Liudmila S. Mainzer
P39: Extremely Large, Wide-Area Power-Line Models
Author
Ross N. Adelman
P40: Running Large-Scale Ultrasound Simulations on Piz Daint with 512 Pascal GPUs
Authors
Filip Vaverka
Bradley E. Treeby
Jiri Jaros
P41: OpenCL-Based High-Performance 3D Stencil Computation on FPGAs
Authors
Hamid Reza Zohouri
Artur Podobas
Naoya Maruyama
Satoshi Matsuoka
P42: TRIP: An Ultra-Low Latency, TeraOps/s Reconfigurable Inference Processor for Multi-Layer Perceptrons
Authors
Ahmed Sanaullah
Chen Yang
Yuri Alexeev
Kazutomo Yoshii
Martin C. Herbordt
P43: Deep Packet/Flow Analysis Using GPUs
Authors
Qian Gong
Wenji Wu
Phil DeMar
P44: Increasing Throughput of Multiprogram HPC Workloads: Evaluating a SMT Co-Scheduling Approach
Authors
Elias Lundmark
Chris Persson
Andreas de Blanche
Thomas Lundqvist
P45: Campaign Storage: Erasure Coding with GPUs
Authors
Walker Haddock
Matthew L. Curry
Purushotham Bangalore
Anthony Skjellum
P46: Understanding How OpenCL Parameters Impact on Off-Chip Memory Performance of FPGA Platforms
Authors
Yingyi Luo
Zheming Jin
Kazutomo Yoshii
Seda Ogrenci-Memik
P47: Understanding Congestion on Omni-Path Fabrics
Authors
Lauren Gillespie
Christopher Leap
Dan Cassidy
P48: Prototyping of Offloaded Persistent Broadcast on Tofu2 Interconnect
Authors
Yoshiyuki Morie
Masayuki Hatanaka
Masamichi Takagi
Atsushi Hori
Yutaka Ishikawa
P49: Toward Exascale HPC Systems: Exploiting Advances in High Bandwidth Memory (HBM2) through Scalable All-to-All Optical Interconnect Architectures
Authors
Pouya Fotouhi
Roberto Proietti
Paolo Grani
Mohammad Amin Nazirzadeh
S. J. Ben Yoo
P50: Energy-Efficient and Scalable Bio-Inspired Nanophotonic Computing
Authors
Mohammadamin Nazirzadeh
Pouya Fotouhi
Mohammadsadegh Shamsabardeh
Roberto Proietti
S. J. Ben Yoo
P51: TuPiX-Flow: Workflow-Based Large-Scale Scientific Data Analysis System
Authors
Sunggeun Han
Jung-Ho Um
Hyunwoo Kim
Kyongseok Park
P52: A Simulation-Based Analysis on the Configuration of Burst Buffer
Authors
Tianqi Xu
Kento Sato
Satoshi Matsuoka
P53: TensorViz: Visualizing the Training of Convolutional Neural Network Using ParaView
Authors
Xinyu Chen
Qiang Guan
Xin Liang
Li-Ta Lo
Simon Su
Trilce Estrada
James Ahrens
P54: Investigating Hardware Offloading for Reed-Solomon Encoding
Authors
John W. Dermer
Gustavo De Leon
Tyler S. Rau
P55: Incorporating Proactive Data Rescue into ZFS Disk Recovery for Enhanced Storage Reliability
Authors
Zhi Qiao
Song Fu
Hsing-bung Chen
Michael Lang
P56: ZoneTier: A Zone-Based Storage Tiering and Caching Co-Design to Integrate SSDs with Host-Aware SMR Drives
Authors
Xuchao Xie
Liquan Xiao
David H.C. Du
P57: Adaptive Tier Selection for NetCDF and HDF5
Authors
Jakob Luettgau
Eugen Betke
Olga Perevalova
Julian Kunkel
Michael Kuhn
P58: Wharf: Sharing Docker Images across Hosts from a Distributed Filesystem
Authors
Chao Zheng
Lukas Rupprecht
Vasily Tarasov
Mohamed Mohamed
Dimitrios Skourtis
Amit S. Warke
Dean Hildebrand
Douglas Thain
P59: Secure Enclaves: An Isolation-Centric Approach for Creating Secure High-Performance Computing Environments
Authors
Ferrol Aderholdt
Susan Hicks
Thomas Naughton
Lawrence Sorrillo
Blake Caldwell
James Pogge
Stephen L. Scott
P60: Managing dbGaP Data with Stratus, a Research Cloud for Protected Data
Authors
Evan F. Bollig
Graham Allan
Benjamin J. Lynch
Yectli Huerta
Mathew Mix
Brent Swartz
Edward A. Munsell
Joshua Leibfried
Naomi Hospodarsky
P61: Cloud Resource Selection Based on PLS Method for Deploying Optimal Infrastructures for Genomic Analytics Application
Authors
Katsunori Miura
Courtney Powell
Masaharu Munetomo
P62: How To Do Machine Learning on Big Clusters
Authors
Thomas Ashby
Tom Vander Aa
Stanislav Bohm
Vojtech Cima
Jan Martinovic
Vladimir Chupakhin
P63: FleCSPH: a Parallel and Distributed Smoothed Particle Hydrodynamics Framework Based on FleCSI
Authors
Julien Loiseau
Hyun Lim
Ben Bergen
Nicholas Moss
P64: romeoLAB : HPC Training Platform on HPC facility
Authors
Jean-Matthieu Etancelin
Arnaud Renard
P65: CAPES: Unsupervised System Performance Tuning Using Neural Network-Based Deep Reinforcement Learning
Authors
Yan Li
Kenneth Chang
Oceane Bel
Ethan Miller
Darrell Long
P66: Analyzing Multi-Layer I/O Behavior of HPC Applications
Authors
Ronny Tschüter
Christian Herold
Bert Wesarg
Matthias Weber
P67: Measuring I/O Behavior on Upcoming Systems with NVRAM
Authors
Christian Herold
Ronny Tschüter
P68: Continuous Clock Synchronization for Accurate Performance Measurements
Authors
Johannes Ziegenbalg
Matthias Weber
P69: Portable Methods for Measuring Cache Hierarchy Performance
Authors
Tom Deakin
James Price
Simon McIntosh-Smith
P70: FFT, FMM, and Multigrid on the Road to Exascale: Performance Challenges and Opportunities
Authors
Huda Ibeid
Luke Olson
William Gropp
P71: Is ARM Software Ecosystem Ready for HPC?
Authors
Fabio Banchelli
Daniel Ruiz
Ying Hao Xu Lin
Filippo Mantovani
P72: New Developments for PAPI 5.6+
Authors
Anthony Danalis
Heike Jagode
Vince Weaver
Yan Liu
Jack Dongarra
P73: HPC Production Job Quality Assessment
Authors
Omar Aaziz
Jonathan Cook
P74: A Methodology for Bridging the Native and Simulated Executions of Parallel Applications
Authors
Ali Mohammed
Ahmed Eleliemy
Florina M. Ciorba
P75: Model-Agnostic Influence Analysis for Performance Data
Authors
Rahul Sridhar
Rushil Anirudh
Jayaraman J. Thiagarajan
Nikhil Jain
Todd Gamblin
P76: A Compiler Agnostic and Architecture Aware Predictive Modeling Framework for Kernels
Authors
William Killian
Ian Karlin
David Beckingsale
John Cavazos
P77: AutoTuneTMP: Auto Tuning in C++ With Runtime Template Metaprogramming
Authors
David Pfander
Dirk Pflüger
P78: Performance Evaluation of Graph500 Considering CPU-DRAM Power Shifting
Authors
Yuta Kakibuka
Yuichiro Yasui
Takatsugu Ono
Katsuki Fujisawa
Koji Inoue
P79: Porting the Opacity Client Library to a CPU-GPU Cluster Using OpenMP 4.5
Authors
Jason S. Kimko
Michael M. Pozulp
Riyaz Haque
Leopold Grinberg
P80: Adaptive Loop Scheduling with Charm++ to Improve Performance of Scientific Applications
Authors
Vivek Kale
Harshitha Menon
Karthik Senthil
P81: Offloading Python Kernels to Micro-Core Architectures
Author
Nick Brown
P82: Performance Evaluation of the NVIDIA Tesla P100: Our Directive-Based Partitioning and Pipelining vs. NVIDIA’s Unified Memory
Authors
Xuewen Cui
Thomas R. W. Scogland
Bronis R. de Supinski
Wu-chun Feng
P83: Contracts for Message-Passing Programs
Authors
Ziqing Luo
Stephen F. Siegel
P84: PRESAGE: Selective Low Overhead Error Amplification for Easy Detection
Authors
VIshal Chandra Sharma
Arnab Das
Ian Briggs
Ganesh Gopalakrishnan
Sriram Krishnamoorthy
P85: GPU Mekong: Simplified Multi-GPU Programming Using Automated Partitioning
Author
Alexander Matz
P86: HyGraph: High Performance Graph Processing on Hybrid CPU+GPUs platforms
Authors
Stijn Heldens
Ana Lucia Varbanescu
Alexandru Iosup
P87: EoCoE Performance Benchmarking Methodology for Renewable Energy Applications
Authors
Paul Gibbon
Matthieu Haefele
Sebastian Luehrs
P88: PetaVision Neural Simulation Toolbox on Intel KNLs
Authors
Boram Yoon
Pete Schultz
Garrett Kenyon
P89: Desh: Deep Learning for HPC System Health Resilience
Authors
Anwesha Das
Abhinav Vishnu
Charles Siegel
Frank Mueller
P90: Global Survey of Energy and Power-Aware Job Scheduling and Resource Management in Supercomputing Centers
Authors
Siddhartha Jana
Gregory A. Koenig
Matthias Maiterth
Kevin T. Pedretti
Andrea Borghesi
Andrea Bartolini
Bilel Hadri
Natalie J. Bates
P91: Assessing the Availability of Source Code in Computational Physics
Authors
Matthew Krafczyk
Victoria Stodden
Yantong Zheng
David Wong
P92: Characterization and Comparison of Application Resilience for Serial and Parallel Executions
Authors
Kai Wu
Qiang Guan
Nathan DeBardeleben
Dong Li
P93: Spacehog: Evaluating the Costs of Dedicating Resources to In Situ Analysis
Authors
Rebecca Kreitinger
Scott Levy
Kurt B. Ferreira
Patrick Widener
P94: Fully Hierarchical Scheduling: Paving the Way to Exascale Workloads
Authors
Stephen Herbein
Tapasya Patki
Dong H. Ahn
Don Lipari
Tamara Dahlgren
David Domyancic
Michela Taufer
P95: GEOPM: A Scalable Open Runtime Framework for Power Management
Authors
Siddhartha Jana
Asma H. Al-rawi
Steve S. Sylvester
Christopher M. Cantalupo
Brad Geltz
Brandon Baker
Jonathan M. Eastep
P96: Correcting Detectable Uncorrectable Errors in Memory
Authors
Grzegorz Pawelczak
Simon McIntosh-Smith
P97: Profile Guided Kernel Optimization for Individual Container Execution on Bare-Metal Container
Authors
Kuniyasu Suzaki
Hidetaka Koie
Ryousei Takano
P98: Energy Efficiency in HPC with Machine Learning and Control Theory
Authors
Connor Imes
Steven Hofmeyr
Henry Hoffmann
P99: The Intersection of Big Data and HPC: Using Asynchronous Many Task Runtime Systems for HPC and Big Data
Authors
Joshua Daniel Suetterlein
Joshua Landwehr
Andres Marquez
Joseph Manzano
Kevin Barker
Guang Gao